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[Taxacom] Catalog of Life Taxonomic Tree

Tony Rees tonyrees49 at gmail.com
Thu Feb 25 16:41:34 CST 2016


Hi Ken, Dan et al., the "missing" algal phyla and classes (photosynthetic
protists and their relatives) are no longer in Cat. of Life since they were
formerly supplied from AlgaeBase which is no longer a CoL partner. So yes,
I would imagine that this tree does reflect present CoL coverage.

Regards - Tony

Tony Rees, New South Wales, Australia
https://about.me/TonyRees

On 26 February 2016 at 08:38, Kenneth Kinman <kinman at hotmail.com> wrote:

> Hi Dan,        It is not the Catalog of Life, because they have all the
> included Phyla (see below).  On the other hand, this tree that is
> supposedly based on the Catalog of Life has omitted entire Phyla:
> Anthoceratophyta, Charophyta, Chlorophyta, Glaucophyta, Rhodophyta,
> Cryptista, Haptophyta, and Ochrophyta (the latter which often divided into
> numerous other phyla).  I don't know if it is just photosynthetic phyla
> that were omitted from his tree, but didn't want to waste more time
> looking.  And it isn't much of a tree if Phylum Arthropoda isn't listed
> next to the other Ecdysozoan phyla.  As I said, this tree needs a lot of
> work.
> ----------------Ken------------------------------------------------------------
>
> Chromista Phylum Bigyra Phylum Cercozoa Phylum Ciliophora Phylum Cryptista
> Phylum Foraminifera Phylum Haptophyta Phylum Miozoa Phylum Ochrophyta
> Phylum Oomycota Phylum Radiozoa    Plantae Phylum Anthocerotophyta Phylum
> Bryophyta Phylum Charophyta Phylum Chlorophyta Phylum Glaucophyta Phylum
> Marchantiophyta Phylum Rhodophyta Phylum Tracheophyta
>
> --------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>
> > From: dstoner at acis.ufl.edu
> > To: taxacom at mailman.nhm.ku.edu
> > Date: Thu, 25 Feb 2016 19:56:42 +0000
> > Subject: [Taxacom]  Catalog of Life Taxonomic Tree
> >
> > (This time with edited subject)
> >
> >
> > Hi Kenneth,
> >
> > > This "tree" needs a lot of work
> >
> > Are your comments about the visualization itself or the underlying
> source data (in this case, Catalogue of Life)?
> >
> > Thanks,
> >
> > Dan Stoner
> > iDigBio / ACIS Laboratory
> > University of Florida
> >
> >
> >
> > ----------------------------------------------------------------------
> >
> > Message: 1
> > Date: Sun, 21 Feb 2016 08:41:56 +0100
> > From: rch <rch at skynet.be>
> > To: taxacom at mailman.nhm.ku.edu
> > Subject: [Taxacom] Catalog of Life Taxonomic Tree
> > Message-ID: <56C96A44.3030802 at skynet.be>
> > Content-Type: text/plain; charset=utf-8
> >
> >
> >     Have you seen the remarkable
> >     Catalog of Life Taxonomic Tree  ?
> >         http://taxontree.bpodgursky.com/
> >
> >     Brief explanation at
> >         http://bpodgursky.com/2016/02/20/catalog-of-life-taxonomic-tree/
> >
> >     Found thanks to this morning's Hackers News
> >     «Complete tree of life visualization using d3 and Catalog of Life»
> >
> >      Richard H
> >
> >
> >
> > ------------------------------
> >
> > Message: 2
> > Date: Sun, 21 Feb 2016 09:56:47 -0600
> > From: Kenneth Kinman <kinman at hotmail.com>
> > To: "taxacom at mailman.nhm.ku.edu" <taxacom at mailman.nhm.ku.edu>
> > Subject: Re: [Taxacom] Catalog of Life Taxonomic Tree
> > Message-ID: <SNT148-W65DE58BBD02581D1C81134C1A20 at phx.gbl>
> > Content-Type: text/plain; charset="iso-8859-1"
> >
> > Hi all,                  I can't say that I would recommend this
> so-called "tree".  It is not only incomplete, but it is not really a tree
> (just a series of interconnected bushes).
> >        The most noticeable is the omission of a lot of photosynthetic
> phyla, such as Chlorophyta and Rhodophyta, and especially most taxa in
> Kingdom Chromista (where are the diatoms, phaeophytes, xanthophytes,
> chrysophytes, etc.).  This "tree" needs a lot of work.
> >
> ----------------------------------------------------------------------------------------------------------------------------------------------
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> >
> > Channeling Intellectual Exuberance for 29 years in 2016.
>
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> Channeling Intellectual Exuberance for 29 years in 2016.
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